BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C07SP1|AL429544
(828 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1770 1641 0.0
>3x_Contig1770
Length = 29267
Score = 1641 bits (828), Expect = 0.0
Identities = 828/828 (100%)
Strand = Plus / Minus
Query: 1 atcccgtgaaagtggtagtcggatcgtttttgaaccatcaatcgtattttacaactgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23335 atcccgtgaaagtggtagtcggatcgtttttgaaccatcaatcgtattttacaactgcat 23276
Query: 61 ttgacaggttgaaggtaccacggaatagatacaacgtcttacaaatagcagaggatcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23275 ttgacaggttgaaggtaccacggaatagatacaacgtcttacaaatagcagaggatcttg 23216
Query: 121 ttgtcaaaaacgtaggtaaacctgtggatgtagttattgaatgggttttgaagcagtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23215 ttgtcaaaaacgtaggtaaacctgtggatgtagttattgaatgggttttgaagcagtttg 23156
Query: 181 aagagtcgttatccaacagtccttcagtggtaatattggaaaaaccggaaattttaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23155 aagagtcgttatccaacagtccttcagtggtaatattggaaaaaccggaaattttaatgg 23096
Query: 241 cactcttcaagttgaacagtgacgagttgcatttgaaattgatcaaccctttacttaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23095 cactcttcaagttgaacagtgacgagttgcatttgaaattgatcaaccctttacttaaac 23036
Query: 301 tatgttccttacttatagtcgtcaactctgtggagtccttcgataacgatttcccagaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23035 tatgttccttacttatagtcgtcaactctgtggagtccttcgataacgatttcccagaac 22976
Query: 361 atctgggtaaggataccgtcgagtttgtaaggtttaccacttcatgtttccataaaagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22975 atctgggtaaggataccgtcgagtttgtaaggtttaccacttcatgtttccataaaagtt 22916
Query: 421 tcctagtactgtcggtgagacccttggacaccggtaaggccaaagacgtgaccggaacgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22915 tcctagtactgtcggtgagacccttggacaccggtaaggccaaagacgtgaccggaacgt 22856
Query: 481 tggctataacccgtggtggtgccttgctggatattcctgcactacacgttgtggaaaacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22855 tggctataacccgtggtggtgccttgctggatattcctgcactacacgttgtggaaaacc 22796
Query: 541 agtatttgttccatgacttgaaggaaaatacaacactattttacagatgatgtacatgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22795 agtatttgttccatgacttgaaggaaaatacaacactattttacagatgatgtacatgaa 22736
Query: 601 taaatactatatactcttcttaaatcctttaataatgtcgtctaatgtgaactcaactgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22735 taaatactatatactcttcttaaatcctttaataatgtcgtctaatgtgaactcaactgc 22676
Query: 661 acagcgggtttttaccaatgaaatgacaggccatgtgctctcctgaccacatttcatcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22675 acagcgggtttttaccaatgaaatgacaggccatgtgctctcctgaccacatttcatcca 22616
Query: 721 atagtttatattatccaatcgtccctcaatgatccgtgacacgcttaacgagttcatgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22615 atagtttatattatccaatcgtccctcaatgatccgtgacacgcttaacgagttcatgtg 22556
Query: 781 aggcacaatggctacttccgtcgcacttcgtggagtcttttcatcaat 828
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22555 aggcacaatggctacttccgtcgcacttcgtggagtcttttcatcaat 22508
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5567
Number of Sequences: 1807
Number of extensions: 5567
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 828
length of database: 10,358,551
effective HSP length: 16
effective length of query: 812
effective length of database: 10,329,639
effective search space: 8387666868
effective search space used: 8387666868
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)